Expired Research Projects
Expired Project Breakdown
The following graph shows the number of expired projects (Full National Service and National Capability Service) per scientific field and per application class (to see the list of projects which are active, please go to this page):
| Chemistry (91) |  3 41 47 |
Class A (13) Class B (125) Class C (336) |
|---|---|---|
| Computer science (37) | 0 6 31 |
|
| Earth sciences (23) | 1 11 11 |
|
| Engineering (72) | 1 10 61 |
|
| Life sciences (110) | 0 21 89 |
|
| Physics (105) | 5 28 72 |
|
| Others (36) | 3 8 25 |
Expired research projects per application class & scientific field
Class A Projects
There are currently 13 expired Class A projects:
| Code | PI | Title |
|---|---|---|
| dcast001a | Dr. Turlough Downes | Turbulence in molecular clouds: beyond magnetic flux freezing |
| ndear011a | Dr. Tido Semmler | Simulating the Global Climate with the EC-EARTH Coupled Atmosphere-Ocean-Ice Model |
| ndeng003a | Dr. Marcus Greferath | Performance Analaysis of Low-Density Parity-Check Codes Derived from Finite Inversive Spaces |
| ndmat007a | Dr. Konstantinos Drakakis | The enumeration of Costas arrays of order 29 |
| ndmat008a | Prof. Gary McGuire | A New Algorithm for Enumerating Hitting Sets |
| ndphy010a | Dr. Niall English | Effects of electric and electromagnetic fields on nanoparticle-protein systems |
| nmphy002a | Dr. Jiri Vala | Topological phases in quantum lattice systems |
| tcphy003a | Prof. Stefano Sanvito | Transport properties of organic macromolecules: modeling at the boundaries between biology and nano-electronics |
| tcphy004a | Prof. Stefano Sanvito | Theory of ferromagnetism in diluted and defective oxides |
| tcphy017a | Dr. Mike Peardon | Lattice Quantum Chromodynamics |
| tiche011a | Dr. Damien Thompson | Faster, bigger, better: supra-nanoscale molecular dynamics for nanoelectronics |
| tiche018a | Dr. Michael Nolan | EMOIN: Engineering Metal Oxide Interfaces |
| tiche020a | Dr. Simon Elliott | Simulating the growth of ultrathin materials for nanoelectronic devices (SIGMUND) |
Class B Projects
There are currently 125 expired Class B projects:
| Code | PI | Title |
|---|---|---|
| dcast002b | Dr. Turlough Downes | Turbulence in molecular clouds: beyond magnetic flux freezing |
| dcast003b | Dr. Stephen O'Sullivan | Second-Order Fermi Acceleration in AGN Radio Lobes |
| dcche005b | Dr. John Gallagher | Structural systematics of n x m isomer grids: comparison of structural data (from diffraction) with ab initio calculations |
| dccom006b | Prof. Heather Ruskin | Large-scale multi-agent simulations of the immune response to HIV infection |
| dccom007b | Dr. Michael Scott | Finding Cryptographic Pairing-friendly elliptic curves |
| dccom008b | Dr. Mary Hearne | Data-Oriented Models of Parsing and Translation |
| dccom019b | Dr. Patrik Lambert | Optimising Hybrid Machine Translation |
| dccom025b | Dr. Michael Scott | Breaking ECC2K-130 |
| dclif015b | Dr. Mary O'Connell | Sequencing and comparative genomic analyses of the Cetacean clade |
| dclif018b | Dr. Mary O'Connell | Evolution of tissue-specific genes and their regulatory elements. |
| dsast002b | Dr. Andrew Lim | Numerical Studies of the Evolution of Structures in H II Regions. |
| dsast005b | Dr. Gareth Murphy | 3D PIC simulations of near and mildly relativistic shocks |
| dsast009b | Prof. Luke Drury | HPC methods for particle acceleration at relativistic shocks |
| dsast010b | Dr. Andrew Taylor | Jet Acceleration |
| dsear002b | Dr. Estelle Roux | Joint inversion of magnetotelluric and surface wave measurements: application to a real dataset from Northern Canada |
| ndche002b | Dr. Niall English | Effects of Electromagnetic Fields on Proteins |
| ndche005b | Dr. Run Long | Band-gap Engineering of TiO2 from first-principles calculations |
| ndear002b | Dr. Steffen Abe | Parallel 3D DEM simulation of dynamic rupture of a rough earthquake fault |
| ndear003b | Dr. David Fitzpatrick | A Fungal Phylogeny Based on 42 Complete Genomes Derived From Supertree and Combined Gene Analysis. |
| ndear006b | Prof. Peter Lynch | Simulating Climate Change in Ireland: Implications for Wind Energy. |
| ndear007b | Prof. Peter Lynch | HiWinds: High resolution forecasts for wind energy applications |
| ndear008b | Dr. Gareth O'Brien | Seismic source modelling and propagation in complex 3D Earth models |
| ndear009b | Dr. Rodrigo Caballero | Present and future statistics of extreme European storms |
| ndear013b | Dr. Gareth O'Brien | Computational seismic wave propagation in complex 3D Earth models |
| ndear015b | Prof. Peter Lynch | ZEPHYR: Dynamical and statistical down-scaling of ensemble forecasts for wind energy applications in Ireland. |
| ndeng002b | Dr. Marco Grimaldi | Evaluation of novel features |
| ndeng004b | Dr. Marcus Greferath | Performance Analaysis of Low-Density Parity-Check Codes Derived from Finite Inversive Spaces |
| ndlif006b | Prof. Paul McKeigue | Statistical methods for admixture mapping and modelling extended haplotypes |
| ndlif007b | Dr. Dominic Zerulla | Simulations of Macromolecule-Nanoparticle Interactions |
| ndlif008b | Dr. Kate Johnston | A search for novel amino acid motifs in protein-protein interactions required for pathogenesis. |
| ndlif010b | Dr. David Fitzpatrick | Searching for Evidence of Interkingdom Horizontal Gene Transfer between Bacteria and CTG species |
| ndlif012b | Prof. Denis Shields | Functional variation in evolution and in populations. |
| ndmat010b | Prof. Gary McGuire | A New Algorithm for Enumerating Hitting Sets |
| ndphy001b | Dr. Ronan McNulty | Starting to Simulate the High Energy Frontie |
| ndphy004b | Dr. Zoltan Neufeld | Aggregation and collective motion of microorganisms in fluid flows |
| ndphy011b | Dr. Niall English | Computational Modelling of Materials for Artificial Photosynthesis |
| ndphy019b | Dr. Niall English | Simulation of photo-electronic excitation in titania nanofilms |
| ngche003b | Prof. John Simmie | Towards a World Class Combustion Chemistry Centre |
| ngche005b | Prof. John Simmie | BurnQuest: Towards a World Class Combustion Chemistry Centre |
| ngcom001b | Dr. Michael Madden | Kernel Methods for Machine Learning with Application to the Analysis of Raman Spectra |
| ngear001b | Dr. Marcel Cure | Hydrodynamic Model of Irish Shelf Waters using ROMS |
| ngear003b | Dr. Michael Hartnett | Coupled Ocean-atmosphere Climate Modelling |
| ngeng002b | Prof. Peter McHugh | 3D Modelling of the mechanical behaviour of Cardiovascular Stents |
| ngeng007b | Dr. Patrick McGarry | Modelling the active evolution of focal adhesions and stress fibres in cells as a result of mechanical stimuli |
| ngeng011b | Prof. Peter McHugh | Development of Discrete Finite Element Cell Model |
| ngeng012b | Dr. Noel Harrison | A FINITE ELEMENT ANALYSIS OF THE MICROSCALE FORCES THAT DRIVE CELL-DERIVED TISSUE FORMATION: A TISSUE ENGINEERING SOLUTION |
| ngeng024b | Dr. Patrick McGarry | ANALYSIS AND DESIGN OF ORTHOPAEDIC FRACTURE FIXATION AND JOINT REPLACEMENT DEVICES |
| ngeng043b | Dr. Nathan Quinlan | Highly parallel, steerable CFD using a Finite-Volume Particle Method |
| nglif002b | Dr. Denis O'Mahoney | Large scale high resolution study of the trabecular bone in vertebral bodies. |
| nglif004b | Prof. Peter McHugh | High Resolution Modelling of Bone Loss in Vertebral Trabecular Bone |
| ngphy003b | Dr. Dmitriy Ivanov | Computational and Experimental Investigation of Sub-Wave Nano-Structuring on Metals with Femto- and Attosecond Laser Sources |
| nmlif004b | Dr. James McInerney | The Tree of one hundred percent |
| nmlif017b | Dr. Davide Pisani | Inferring the eukaryotic tree of life using single and multi gene families |
| nmlif021b | Dr. James McInerney | Duplication patterns and network centralities in the primate phylogeny |
| nmphy003b | Dr. Jonivar Skullerud | Hot QCD simulations on anisotropic lattices |
| tcche003b | Prof. Graeme Watson | Electronic Structure Studies of Transparent Semiconductors |
| tcche004b | Dr. Natasha Galea | QM/MM Study of Isolated Surface Defects on Ceria |
| tcche005b | Prof. Graeme Watson | DeNOx catalysis on Ceria Surfaces |
| tcche006b | Dr. Benjamin Morgan | Electronic structure studies of the defect chemistry of TiO2 |
| tcche007b | Prof. Graeme Watson | Optimisation of Ionic Conductivity in Intermediate Temperature Solid Oxide Fuel Cells |
| tcche008b | Dr. Jeremy Allen | Defect Properties of Tin Monoxide |
| tcche009b | Prof. Graeme Watson | Optimizing the Oxygen Storage Capacity of Ce1-xMxO2 (M = Noble Metal) |
| tcche010b | Prof. Graeme Watson | The behaviour of hydrogen defects in p-type oxides |
| tcche011b | Prof. Graeme Watson | Electronic structure calculations of dopants in SnO2 |
| tcche012b | Dr. Benjamin Morgan | The role of oxygen vacancies in the ferromagnetism of V-doped TiO2 |
| tcche014b | Dr. Natasha Galea | Modeling Oxidation States of Ce within Cerium Oxide using DFT+U and Hybrid-DFT : Choosing an Appropriate U |
| tcche015b | Dr. Jeremy Allen | Oxygen defects in UO2 |
| tcche016b | Prof. Graeme Watson | Sources of Conductivity in Cadmium Oxide |
| tcche017b | Prof. Graeme Watson | Defect chemistry of Lead Dioxide: Metallic or semiconducting? |
| tcche027b | Dr. Michael Bridge | Comparative Study of deNOx (x = 1, 2) Chemistry on Rh, Pd and Pt {111} surfaces |
| tclif003b | Dr. Gemma Kinsella | Investigating the conformational dynamics of the Glucocorticoid Receptor |
| tclif004b | Dr. Gemma Kinsella | Investigating ligand interactions with the Estrogen receptor α and β |
| tclif006b | Dr. Gemma Kinsella | The Retinol Binding Protein System and Type 2 Diabetes |
| tclif012b | Dr. Giorgio Carta | PPARgamma Tiered Virtual Screening- Development of an Improved Post-Hit Scoring Process |
| tcphy001b | Prof. Stefano Sanvito | Transport Properties of nanoscale devices: A proposal to the Irish Centre for High End Computing |
| tcphy005b | Prof. Stefano Sanvito | Simulating Electronic Transport in Scanning Tunneling Microscopy |
| tcphy007b | Dr. Sri Chaitanya Das Pemmaraju | Defects and impurities induced magnetism in Oxide Semiconductors and Insulators |
| tcphy008b | Dr. Charles Patterson | Spin and charge polarons and their impact on magnetism and charge transport in oxides |
| tcphy011b | Dr. Nadjib Baadji | Scanning Tunneling Microscopy for Magnetic Molecules |
| tcphy012b | Dr. Maria Stamenova | Ab initio simulations of spin-dynamics |
| tcphy013b | Dr. Claude Ederer | Functional properties of multiferroic heterostructures |
| tcphy015b | Multiferroic tunneling junctions | |
| tcphy016b | Dr. Ivan Rungger | Development of a large scale ab initio electron transport simulation program |
| tcphy018b | Dr. Mike Peardon | Lattice Quantum Chromodynamics |
| tcphy021b | Dr. Charles Patterson | Spectroscopies of functional oxides by computer simulation |
| tcphy022b | Magnetoelectric effect in tunneling junctions: a route to room temperature multiferroic devices. | |
| tglif003b | Dr. Chris Creevey | Metagenomic analysis of the ruminal microbial populations in cattle divergent for nutritional efficiency |
| tiche001b | Dr. Simon Elliott | Electronic structure of dielectric materials |
| tiche002b | Dr. Damien Thompson | Simulation of molecular printboards for nanopatterning |
| tiche003b | Dr. Damien Thompson | Simulating the Behaviour of Organic Macromolecules at the Liquid-Liquid Interface |
| tiche004b | Dr. Michael Nolan | Controlling Catalysis on TiO2 Surfaces: an Ab Initio Approach |
| tiche005b | Dr. Michael Nolan | First principles materials design of transparent conducting oxides |
| tiche006b | Dr. Michael Nolan | Metal Oxide Surfaces and Interfaces: at the Frontier of First Principles Simulations |
| tiche007b | Dr. Damien Thompson | Computer simulations of nanopatterning systems |
| tiche008b | Dr. Andreas Larsson | Doped fullerenes and peapod nanotubes - a first-principles investigation |
| tiche009b | Dr. Simon Elliott | Growth of rare earth metal oxides as high-k dielectrics |
| tiche010b | Dr. Michael Nolan | First Principles Simulations of Shape Memory Alloys Based on NiTi |
| tiche012b | Dr. Damien Thompson | Faster, bigger, better: supra-nanoscale molecular dynamics for nanoelectronics |
| tiche013b | Dr. Damien Thompson | Atom-scale structure, dynamics and energetics of alkanethiol bilayers as nanostructure-directing agents |
| tiche015b | Dr. Michael Nolan | Oxidation of Ternary Shape Memory Alloys Based on NiTi using First Principles Simulation |
| tiche017b | Dr. Damien Thompson | The interaction of room temperature ionic liquids with phospholipid bilayers: a computational investigation |
| tiche021b | Dr. Michael Nolan | Supported Metal Oxide Clusters as Reactive Catalytic Centres |
| tiche023b | Dr. Michael Nolan | Surface Reactions at Metal Oxides from Hybrid Density Functional Theory |
| tiche026b | Dr. Michael Nolan | Hybrid Density Functional Theory Investigations of Band Gap Modulation in Semiconductor Nanowires |
| tiche028b | Dr. Jim Greer | Ab initio study of CNT-metal contact characteristics |
| tiche030b | Dr. Damien Thompson | Computer-aided design of controllable interfaces for nanoelectronics |
| tiche032b | Dr. Michael Nolan | Porphyrin-TiO2 Assemblies for Dye Sensitized Solar Cells |
| tilif001b | Dr. Damien Thompson | CODEX: A multi-disciplinary approach to engineer the genetic code |
| tilif002b | Dr. Damien Thompson | Design of novel Ellipticine Kit kinase inhibitors |
| tiphy001b | Dr. Geoffrey Stenuit | Electronic transport and vibrational properties in dilute GaAs:N |
| tiphy002b | Dr. Giorgos Fagas | Electronic Structure and Transport Properties of Molecules and Nanowires |
| tiphy004b | Dr. Sian Joyce | First Principles Predictions of Nuclear Magnetic Resonance J-Coupling |
| tiphy005b | Dr. Giorgos Fagas | Band Gap Modification in Semiconductor Nanowires |
| tiphy007b | Dr. Jim Greer | Atomic scale model interfaces between high-k silicates and germanium |
| tiphy008b | Prof. Stephen Fahy | Nanoscale Simulators in Ireland (NSI) Graduate Programme Practicals |
| tiphy009b | Dr. Maria Elena Grillo | Charge retention in SONOS non-volatile memory devices: oxide-nitride interfaces and deposition process |
| tiphy012b | Dr. Giorgos Fagas | Electronic Properties of Oxidised Silicon Nanowires |
| ucast003b | Dr. Mark Hannam | Gravitational-wave astronomy from black-hole collisions |
| uceng001b | Dr. Liam Marnane | Analysis of new Low Density Parity Check Codes |
| uclif002b | Dr. Charles Spillane | Identification of orphan (ORFan) genes in fully sequenced genomes of higher eukaryotes. |
| uclif007b | Dr. Charles Spillane | Identifying Taxon Restricted Genes in Higher Plants and Epigenomics of genome dosage in Arabidopsis thaliana |
| ucphy002b | Dr. Michael Flynn | Timing and Amplitude Jitter of Passively Mode-locked Quantum-Dot Semiconductor Diode Lasers |
| ulche001b | Dr. Jacek Zeglinski | Surface Structure of Biological Hydroxyapatite from First Principles Simulation |
| uleng003b | Mechanical behaviour of interlinked carbon nanotubes for nanocomposites | |
| appndphy054 | Dr. Antonio Benedetto | Molecular dynamics simulations of lipid bilayer stacks in water solutions of room temperature ionic liquids |
Class C Projects
There are currently 336 expired Class C projects:
| Code | PI | Title |
|---|---|---|
| cslif001c | Dr. Jim Kennedy | Analysis of effect of adding bone-graft to plate fixation of proximal humeral fractures |
| cslif002c | Dr. Heinrich Huber | Cellular Automaton based reaction-diffusion-modeling from single cell imaging time series |
| cslif003c | Dr. Gianpiero Cavalleri | Identification of brain endophenotypes in temporal lobe epilepsy through the application of quantitative MRI |
| cslif004c | Mr. Robert O'Brien | Exploring the role of human genome variation in renal transplantation |
| cslif006c | Mr. Christopher Whelan | Global structural morphology and connectivity in lesional and non-lesional temporal lobe epilepsy: A combined MRI, DTI & genomic analysis |
| cslif007c | Mr. Robert O'Brien | Ireland and the 1000 Genomes Project (imputation assessment) |
| dcche001c | Dr. Pavle Mocilac | Molecular modelling and ab initio calculations benzamides and pyridinecarboxamides. |
| dcche002c | Dr. Sarah Kebbell | Synthesis and DFT calculations of 1,2,3,5-tetrazocines |
| dcche003c | Dr. John Gallagher | Molecular modelling and ab initio calculations of (i) Methyl-N-(methylbenzoyl)-N-(2-pyridyl)benzamides and their halo analogues and (ii) pyridinecarboxamides |
| dcche004c | Prof. Conor Long | Estimating the potential energy surfaces around pi-coordinated arene ligands in (eta-Arene)Cr(CO)3 complexes |
| dcche006c | Dr. Daniel Hillebrand O' Donovan | The rational design of alpha 2 adrenoceptor antagonists as potential antidepressants |
| dccom001c | Dr. Nicolas Stroppa | Data-driven Machine Translation |
| dccom002c | Prof. Heather Ruskin | Large-scale mutli-agent simulations of the immune response to HIV infection. |
| dccom003c | Dr. Djame Seddah | Parsing the British National Corpus (100M Words) with Automatically Acquired Deep probabilistic LFG Resources |
| dccom004c | Dr. Mary Hearne | Combining Linguistics, Statistics and Examples: Data-Oriented Translation |
| dccom005c | Dr. Michael Scott | Finding Cryptographic Pairing-friendly elliptic curves. |
| dccom009c | Dr. Mary Hearne | Exploiting Parallel Treebanks to Improve Data-Driven MT |
| dccom010c | Dr. Mary Hearne | Large-Scale Statistical Machine Translation |
| dccom011c | Prof. Barry McMullin | Evolving Cell Signalling Networks in silico: Role of Network "Closure" |
| dccom012c | Dr. Patrik Lambert | Intrinsic and Extrinsic Word Alignment Tuning |
| dccom013c | Dr. Deirdre Hogan | TREC-2008 Blog Track - Parsing for Sentiment Analysis |
| dccom014c | Dr. Jinhua Du | Large-scale Hybrid Machine Translation Model and Distributed Language Model Training |
| dccom015c | Dr. Jinhua Du | Optimising Statistical Machine Translation |
| dccom016c | Dr. Michael Scott | Attacking the McEliece cryptosystem. |
| dccom017c | Dr. Patrik Lambert | Baseline Discriminative Word Alignment System |
| dccom018c | Dr. Lamia Tounsi | Arabic Treebank-Based LFG parsing |
| dccom020c | Dr. Dimitri Perrin | Large-scale multi-agent simulations of disease spread in large human populations |
| dccom021c | Prof. Heather Ruskin | Multi-Layer Models of Epigenetic Mechanisms |
| dccom022c | Mr. Sergio Penkale | Fragment Rescoring for Data-Oriented Translation |
| dccom023c | Dr. Michael Scott | ECC2K-130 |
| dccom024c | Mr. Rejwanul Haque | Semantic Information as Source Context in Phrase-Based SMT |
| dccom026c | Mr. Tsuyoshi Okita | Hybrid Machine Translation |
| dccom027c | Dr. Jie Jiang | Hierarchical Phrase-Based Machine Translation Augmented with Combinatory Categorial Grammars |
| dccom028c | Ms. Kabita Shakya | Content Evaluation and Tool Development for Knowledge Management System: Colon Cancer |
| dccom029c | Ms. Karthika Raghavan | Predictive Computational Micromodels for Epigenetic Mechanisms |
| dccom030c | Dr. Jennifer Foster | Confident MT: Domain Adaptation of Natural Language Processing for Improving Machine Translation Performance |
| dchum001c | Dr. Djame Seddah | Inducing Wide Coverage LFG Grammar from a very large subset of the English Wikipedia |
| dclif001c | Dr. Mary O'Connell | Phylogenetics of mammalian peroxidases |
| dclif002c | Dr. Mary O'Connell | Evolution of mammalian reproductive proteins. |
| dclif003c | Dr. Mary O'Connell | Resolution of the phylogeny of hydrogenases |
| dclif004c | Dr. Noeleen Loughran | Evolution of mammalian reproductive proteins |
| dclif005c | Mr. Thomas Walsh | Evolution of Tissue Specific Genes |
| dclif006c | Dr. Colin Clarke | Application of machine learning and gene selection methods for whole genome microarray analysis of breast cancer. |
| dclif007c | Dr. Mary O'Connell | Evolutionary Analysis of the Fanconi Anemia pathway |
| dclif008c | Dr. Noeleen Loughran | The evolution of genomic imprinting |
| dclif009c | Mr. Thomas Walsh | The evolution of a placental specific regulatory network. |
| dclif010c | Mr. Mark Lynch | Analysis of sequence patterns from surface layer proteins isolated from different strains of C. difficile |
| dclif011c | Mr. Thomas Walsh | Selection analysis on key interacting partners of a placental regulatory network |
| dclif012c | Mr. Mark Lynch | Analysis of sequence patterns from surface layer proteins isolated from different strains of C. difficile. |
| dclif013c | Ms. Claire Morgan | Sequencing and Comparative Genomic Analysis of the Cetacea |
| dclif014c | Dr. Noeleen Loughran | Adaptive evolution of mammalian imprinted genes |
| dclif016c | Ms. Claire Morgan | Evolution of the Mammalian Innate Immune System |
| dclif017c | Dr. Noeleen Loughran | Imprinted Retrogene Evolution |
| dclif019c | Dr. Andrew Edward Webb | Immunoinformatics: Deciphering the Evolution of the Mammalian Innate Immune Network using Comparative- and Paleo- Genomics |
| dclif020c | Ms. Claire Morgan | Mammalian Phylogeny and Evolution: Heterogeneous Modeling Approach |
| dclif021c | Ms. Kate Lee | Evolution of Lung Tissue in the Animalia |
| dcphy001c | Dr. Lampros Nikolopoulos | Time-dependent Schrodinger Equation of Multielectron Systems in an Electromagnetic Field: Parallel implementations of PTDSE code |
| dcphy002c | Mr. Sean Kelly | Modelling of Atmospheric Plasma Systems |
| dcphy003c | Dr. Lampros Nikolopoulos | GPU_TDSE: Solving the Atomic/Molecular Time-dependent Schrodinger Equation on a Graphics Processing Unit with CUDA/OpenCL platforms |
| dsast001c | Dr. Paul Dempsey | Particle Acceleration at Relativistic Shocks |
| dsast003c | Dr. Gareth Murphy | PIC simulations of near and mildly relativistic shocks |
| dsast004c | Dr. Jose Gracia | OpenSESAMe - A tool for automated synthetic observations |
| dsast006c | Dr. Sean Delaney | Investigation of Particle Acceleration in Astrophysical Shocks using Parallel Computing Techniques |
| dsast007c | Dr. Maria Chernyakova | FERMI Data Analysis |
| dsear001c | Dr. Estelle Roux | Joint Inversion of Magnetotelluric and Surface-wave Data in an Anisotropic Earth |
| dsear003c | Mr. Eric Mandolesi | Inversion of 2D magnetotelluric data using image registration constraints |
| dsphy001c | Dr. Subrata Bal | Simulating Noncommutative Yang Mills Gauge Theory on Fuzzy Manifolds |
| dsphy002c | Dr. Volker Braun | A Prelude to Numerical Calabi-Yau Geometry |
| dteng001c | Mr. Gerard Heapes | Massively parallel architectures for particle methods. |
| dteng002c | Mr. David Martin | A Numerical Analysis of Balloon-Expandable Coronary Stents |
| dteng003c | Mr. Fergal O'Rourke | A Numerical Analysis of Tidal Current Turbines using Computational Fluid Dynamics |
| dteng004c | Mr. Conor Briody | Numerical Simulation of Flexible Polyurethane Seating Foam |
| dteng005c | Mr. David Martin | A computational fluid dynamics analysis of blood flow in a stented coronary artery |
| dteng006c | Mr. Colm Carey | A New Congested Traffic Load Model For Long-Span Bridges |
| icast001c | Mr. Alastair McKinstry | Impact modeling of ocean planets using ZEUS Initial software development and benchmarking |
| icast002c | Dr. Andy Shearer | Numerical Simulations of Cataclysmic Variable Systems to create |
| icast003c | Mr. Alastair McKinstry | Tidally-driven oceanic circulation of exoplanets |
| icphy001c | Dr. JC Desplat | A study of 3-D binary fluid mixtures under shear |
| icphy002c | Dr. Andy Shearer | Simulations of radiation transport using Penelope |
| icphy003c | Mr. Alin Elena | Time Dependent Tight Binding+U: Applications to Fluorescent Molecules |
| iteng001c | Dr. Brendan McCormack | Finite element modelling of skin wrinkling |
| iteng002c | Mr. Padraig Varley | Vibration Analysis of Bone Fracture using Finite Element Analysis and Experimental Modal Analysis |
| iteng004c | Dr. Garret Brady | The LinGen project |
| meear001c | Mr. Ray McGrath | Hirlam |
| ndast001c | Mr. Alex Byrne | Particle Acceleration In A Turbulent Magnetic Field |
| ndast002c | Mr. Alex Byrne | Particle Acceleration In A Turbulent Magnetic Field |
| ndast004c | Dr. Barry Wardell | Self-consistent orbital evolution of particles around black holes |
| ndche001c | Dr. Niall English | Effects of Electromagnetic Fields on Proteins |
| ndche003c | Dr. Andrew Phillips | In silico evaluation of NacNac transition metal catalyst precursors |
| ndche004c | Dr. Niall English | Simulation of photo-electronic excitation in dye-titania complexes |
| ndche006c | Dr. Niall English | Ab initio studies of photo-electronic excitation in Dye-Sensitized Solar Cells |
| ndche007c | Dr. Andrew Phillips | Selective and Adaptable Ruthenium based Pharmaceuticals for Initiating Apoptosis SARPIA |
| ndear001c | Dr. David Fitzpatrick | Comparative genomics of pathogenic Candida species and a supertree analysis of 43 fungal genomes |
| ndear004c | Prof. Peter Lynch | COSMO-WINDS |
| ndear005c | Dr. Rodrigo Caballero | Numerical simulation of extreme European storms |
| ndear012c | Dr. Gareth O'Brien | Numerical modelling ground deformation associated with volcanic unrest |
| ndear014c | Prof. Peter Lynch | ZEPHYR: Dynamical and statistical down-scaling of ensemble forecasts for wind energy applications in Ireland. |
| ndeng001c | Evaluation of novel features in speaker identification | |
| ndeng005c | Mr. Philip Cardiff | The development of a numerical model of the hip joint |
| ndeng006c | Ms. Julie Motherway | The Dynamic Response of Cranial Bone |
| ndeng010c | Dr. David Browne | Numerical modelling of fluid flow and interface evolution in the process of welding with smoothed particle hydrodynamics and parallel computation |
| ndeng012c | Ms. Aisling Ni Annaidh | The mechanics of stabbing: a combined experimental and numerical study of sharp force injury |
| ndhum001c | Estimating Binary Spatial Autoregressive Models in Political Science | |
| ndlif001c | Dr. Kate Johnston | A preliminary search for novel motifs involved in bacterial - pathogen interactions. |
| ndlif002c | Dr. Richard Edwards | Large scale prediction of protein-protein interaction motifs in yeast |
| ndlif003c | Prof. Denis Shields | High throughput discovery of protein-protein interaction mediating short, linear motifs in mammals |
| ndlif004c | Dr. Ivan Baran | Pharmacophore modelling of short peptide motifs and their similarity to drugs. |
| ndlif005c | Dr. Dominic Zerulla | Simulations of Macromolecule-Nanoparticle Interactions |
| ndlif009c | Dr. Peadar O'Gaora | Biomarker identification from large biological datasets |
| ndlif011c | Dr. Fergal Casey | Investigation of peptide docking profiles against peptide binding domains as a indicator of similar bioactivity. |
| ndlif013c | Dr. Michael Bekaert | Adaptive evolution of vision in Bats |
| ndlif014c | Prof. Brendan Loftus | Genome assembly using short reads from next generation sequencing platform. |
| ndlif015c | Dr. Norman Davey | High throughput discovery of short, linear motifs |
| ndlif016c | Dr. Jennifer Commins | UniPrime2: a web service providing easier Universal Primer design |
| ndlif017c | Dr. Marc Birtwistle | A first-principles approach to engineering Forster Resonance Energy Transfer probes for measuring biochemical activities in live cells. |
| ndlif018c | Dr. Jens Nielsen | Optimization and Profiling of PEAT_SA on a large HPC System |
| ndlif019c | Ms. Catherine Kelly | Investigating homology-based molecular models of the Aplysia californica cell adhesion molecule |
| ndlif021c | Prof. Pauline Rudd | Molecular modelling of the carbohydrate structures and their complexes with IgG and a number of Fc gamma receptors |
| ndmat001c | Dr. Zoltan Neufeld | Aggregation and collective motion of microorganisms in fluid flows |
| ndmat002c | Dr. Zoltan Neufeld | Collective search strategies in turbulent flows |
| ndmat003c | Prof. Gary McGuire | Minimum Number of Clues Problem |
| ndmat004c | Prof. Frederic Dias | Numerical computation of overturning waves |
| ndmat005c | Prof. Frederic Dias | VOLNA |
| ndmat006c | Dr. Scott Rickard | Enumeration of Costas arrays of order 28 |
| ndphy002c | Dr. Zoltan Neufeld | Aggregation and collective motion of microorganisms in fluid flows |
| ndphy003c | Dr. Nicolae-Viorel Buchete | Multiscale Study of Molecular Aggregation Processes |
| ndphy005c | Mr. Ronan Murphy | All-atom Simulations of Protein Folding Processes |
| ndphy006c | Mr. Ronan Murphy | Multiscale Study of Protein Folding Processes |
| ndphy007c | Mr. Cathal Leahy | Study of Conformational Changes in Short Peptides |
| ndphy008c | Ms. Florentina Tofoleanu | Structural and energetic properties of Alzheimer’s A-beta amyloid fibrils |
| ndphy009c | Dr. Nicolae-Viorel Buchete | Multiscale Study of Molecular Aggregation Processes |
| ndphy010c | Mr. Alin Elena | Deprotonation of organic molecules in solution: study of the reaction mechanism and rate by modern techniques for simulating rare events in combination with ab-initio molecular dynamics |
| ndphy012c | Dr. Simone Meloni | Amorphous-Crystal phase transition in Silicon nanoparticles embedded in amorphous SiO2 matrices |
| ndphy013c | Dr. Simone Meloni | Optical properties of nc-Si embedded in a-SiO2 |
| ndphy014c | Dr. Grazia Cottone | Large Scale Conformational Transitions In Ligand Gated Ion Channels Benchmarking |
| ndphy015c | Dr. Donal MacKernan | Temperature Accelerated Molecular Dynamics Simulations of Polymer Electrolyte Membrane Fuel Cells |
| ndphy016c | Dr. Simone Meloni | Validation of a new method for the acceleration of atomistic simulations: application to the homogeneous nucleation of undercooled Lennard-Jones liquids. |
| ndphy017c | Ms. Florentina Tofoleanu | Structural and stability elements of amyloid fibrils near lipid membranes |
| ndphy018c | Prof. David Coker | Excitation Energy Transfer in Light Harvesting Nanostructures: Quantum Coherent Dynamics and Correlated Environmental Fluctuations |
| ndphy021c | Dr. Grazia Cottone | Kinetics of geminate recombination of nitric oxide in myoglobin mutants in water, under continous photo-illumination, with Non Equilibrium Molecular Dynamics |
| ndphy023c | Ms. Catherine Kelly | Validation of homology-based molecular models using all-atom molecular dynamics simulations with explicit solvent |
| ndphy024c | Dr. Simone Meloni | Nanoscale thermal transport |
| ndphy025c | Dr. Niall English | High-level DFT-based rational design of photovoltaic materials with tailored optoelectronic properties |
| ndphy026c | Mr. Frank McQuillan | Molecular Modelling of Fibronectin Domain 1 in Aplysia Cell Adhesion Molecule |
| ndphy027c | Dr. Run Long | Unexpected magnetism induced by non-magnetic elements from density functional theory calculations |
| ndphy028c | Dr. Niall English | Simulation of electronic structure and photovoltaic properties of metal oxides using hybrid density functional theory |
| ndphy029c | Mr. Jeremy Lucid | Probing Selected Morphological models of Hydrated Nafion using Temperature Accelerated Molecular Dynamics Simulations |
| ndphy030c | Ms. Florentina Tofoleanu | Polymorphism of Amyloid Fibrils |
| ndphy031c | Mr. Frank McQuillan | Predicting Conformational Changes in apCAM Domains |
| ndphy033c | Ms. Catherine Kelly | MD refinement of homology models for the immunoglobulin-like domains of apCAM |
| ndphy034c | Dr. Nicolae-Viorel Buchete | Conformational and Kinetic Properties of Amyloid-Forming Amylin (IAPP) Peptides |
| ndphy039c | Dr. Daniel O'Brien | A Geant4 Monte Carlo Investigation into the Properties of Small Photon Fields for Flattened and Unflattened Radiotherapy Beams |
| ndphy041c | Dr. Niall English | Benchmarking of exact exchange for DFT modelling of titania |
| ndphy042c | Dr. Marco Lauricella | Study of nucleation mechanism and rate of Methane Hydrate Clathrate. |
| ndphy043c | Mr. Nicolas Genin | Exploring biophysical properties of collagen nanofibrils |
| ndphy047c | Dr. Run Long | Electronic structure and photocatalyitc properties of metal oxides from hybrid density functional theory calculations |
| ngche001c | Prof. John Simmie | Creation of World Class Combustion Chemistry Centre |
| ngche002c | Dr. Maria Navarro | Quantum mechanical computations applied to thermochemistry calculations |
| ngche004c | Dr. Catherine Hayes | Investigation into the relationship between sweet taste and binding energies using classes of sweet compounds & 5 homology modelled taste receptors. |
| ngche006c | Dr. Patrick O'Leary | Modeling of silica surface interactions with transition metal catalysts |
| ngche007c | Mr. Kieran Somers | The Oxidation of Dimethyl Furan under Combustion Conditions: Experiments and Modelling |
| ngche008c | Ms. Aoife Mulvihill | The study of butanol under combustion conditions: Combustion and modelling |
| ngche009c | Prof. Leif A. Eriksson | INVESTIGATION OF THE EFFECT OF THE CONFORMATION ON THE ELECTRONIC PROPERTIES OF CAROTENOIDS |
| ngche010c | Prof. Leif A. Eriksson | Conversion of Monomeric Protein UVR8 to an Obligate Dimer by Computational protein Design |
| ngche011c | Prof. Leif A. Eriksson | MD simulations of 5-aminolevulinic acid derivatives in lipid membranes |
| ngche012c | Prof. Leif A. Eriksson | Investigation of ERI - ligand interaction by steered molecular dynamics simulations |
| ngche013c | Mr. Jorge Mendes | Detailed ab initio calculations of combustion chemistry kinetics of oxygenated biofuels |
| ngear002c | Dr. Saji Varghese | Impact of aerosols and chemical transport on the climate of Western Europe |
| ngeng001c | Prof. Peter McHugh | Scalability of Size Effects in Small Metallic Cardiovascular Devices |
| ngeng003c | Dr. Nathan Quinlan | Computational fluid dynamics simulations of turbulent flow in prosthetic heart valves |
| ngeng004c | Dr. Nathan Quinlan | Characterising the fluid dynamics and particle trajectories in anatomically realistic airway bifurcations at multiple breathing frequencies and flow rates |
| ngeng005c | Dr. Patrick McGarry | Modeling the evolution of the cellular actin cytoskeleton |
| ngeng006c | Dr. Indiana Olbert | PRISM - Predictive Irish Sea Models |
| ngeng008c | Dr. Senan Cahill | Finite Element Analysis of the Mechanical Properties of Bone Tissue Engineering Scaffolds fabricated using Rapid Prototyping Techniques |
| ngeng009c | Dr. Noel Harrison | A FINITE ELEMENT ANALYSIS OF THE MICROSCALE FORCES THAT DRIVE CELL-DERIVED TISSUE FORMATION: A TISSUE ENGINEERING SOLUTION |
| ngeng010c | Prof. Peter McHugh | Development of Discrete Finite Element Cell Model |
| ngeng013c | Dr. Michael Hartnett | Development of Coupled Ocean-Atmosphere Climate Model |
| ngeng014c | Ms. Riona Ni Ghriallais | Investigation of Vascular Injury in the Superficial Femoral Artery Due to Stenting |
| ngeng015c | Ms. Emer Feerick | Development of Advanced Analysis and Testing Methodologies for the Design of a Novel Device for the Fixation of Proximal Humerus Fractures |
| ngeng016c | Ms. Nicola Kelly | Computational Analysis of Normal and Postoperative Knee Joint Mechanics |
| ngeng017c | Mr. Cathal Tomas | The optimisation of the straightening process for stainless steel wires |
| ngeng018c | Ms. Caroline Hopkins | A computational investigation into the delamination of biomedical stent coatings |
| ngeng019c | Mr. Enda Dowling | Investigation of the Role of the Cytoskeleton in the Response of Chondrocytes to Mechanical Stimuli |
| ngeng020c | Ms. Claire Conway | 3D Finite Element Modelling of Coronary Stent Implantation |
| ngeng021c | Mr. James Grogan | Towards the estimation of minimum strut sizes in coronary stents |
| ngeng022c | Mr. Eamonn O'Mairtin | A mixed-mode cohesive zone model for cell-substrate interfaces |
| ngeng023c | Ms. Caitriona Killeen | Hydrodynamic Modelling of the Interaction of Arrays of Wave Energy Converters |
| ngeng025c | Mr. Neil Duffy | Optimisation of Biomass-Fuelled Systems using CFD |
| ngeng026c | Mr. Oliver McCarthy | MICROSTRUCTURE SENSITIVE CRACK NUCLEATION IN FRETTING |
| ngeng027c | Dr. Ricardo Santiago Mozos | Development of an automatic screening system for Tuberculosis |
| ngeng028c | Ms. Riona Ni Ghriallais | Comparison of Computational Modelling Techniques of Self Expanding Stents in the Superficial Femoral Artery to Determine Levels of Vascular Injury |
| ngeng029c | Mr. Teng Zhang | Computational modelling of fatigue-wear damage interaction for fretting |
| ngeng030c | Dr. Nathan Quinlan | HPC implementation of mesh-free computational fluid dynamics |
| ngeng031c | Mr. William Ronan | Simulation of Stress Fibre Remodelling and Mixed-Mode Focal Adhesion Assembly During Cell Spreading and for Cells Adhered to Elastic Substrates |
| ngeng032c | Mr. Eamonn O'Mairtin | Cohesive Zone Modelling of Abdominal Aortic Aneurysm Rupture |
| ngeng033c | Ms. Claire Conway | Application of a Geometrical Computational Test-Bed to Model Coronary Stent Implantation |
| ngeng034c | Mr. Oliver McCarthy | A study of the key microstructural features on fatigue crack nucleation |
| ngeng035c | Ms. Magdalena Hajdukiewicz | Formal calibration methodology for CFD models of internal environments. |
| ngeng037c | Ms. Caoimhe Sweeney | Microstructural Modelling of Fatigue Crack Nucleation in Stents |
| ngeng038c | Mr. Enda Dowling | Investigating the Effect of Focal Defects on the Response of Chondrocytes Embedded in an Extracellular Matrix during Articulation |
| ngeng039c | Mr. Tadhg Farragher | A study of thermomechanical failure of power plant components |
| ngeng040c | Ms. Riona Ni Ghriallais | Investigating the Effects of Knee Flexion on Stented Peripheral Arteries |
| ngeng041c | Mr. Jack English | Nonlinear Seismic Response of Concentrically Braced Frames using a Finite Element Model |
| ngeng042c | Dr. Mihai Basa | Highly parallel, steerable CFD using a Finite-Volume Particle Method |
| nglif001c | Dr. Denis O'Mahoney | Parallel Methods for Finite Element Solution of Voxel Generated Meshes of Trabecular Bone – MPI Implementation |
| nglif003c | Dr. Aaron Golden | Novel methods for annotating metagenomic assemblies using the Self Organising Map (SOM) |
| nglif005c | Dr. Aaron Golden | Characterising co-regulated transcription factors associated with in-vivo CTCF binding genomewide |
| nglif006c | Dr. Aaron Golden | Novel Binding Site Motifs associated with Imprinted Genes in Human and Mouse |
| nglif007c | Prof. Leif A. Eriksson | Inhibitors of Tip60-androgen receptor dimerization |
| nglif008c | Mr. Boxue Tian | Theoretical study on the catalytic mechanism of the Sortase A enzyme |
| nglif009c | Mr. Min Wu | Molecular Dynamics Simulation and Structural Analysis of Aurora-A and IPL-1 Kinases and their Mutants |
| nglif010c | Prof. Leif A. Eriksson | MD Simulations of Hypericin Containing Micelles |
| nglif011c | Dr. Mark Donoghue | Identification of ORFan genes and their evolutionary origins genes in the C4 cereal Sorghum bicolor |
| nglif012c | Dr. Mark Donoghue | Determining whether imprinted plant genes may be subject to fast evolution via positive Darwinian selection and/or dosage compensation due to duplication. |
| nglif013c | Prof. Cathal Seoighe | Assembly and analysis of hydractinia genomes |
| nglif014c | Dr. Gerhard Schlosser | Identification of Six1 and Eya1 target genes in Xenopus laevis using RNA-Seq - a pilot study |
| ngmat001c | Prof. Ted Hurley | Dihedral Codes |
| ngphy001c | Prof. Michael Conneely | Calculation and Classification of Multiply Excited States |
| ngphy002c | Dr. Dmitriy Ivanov | Computational and Experimental Investigation of Sub-Wave Nano-Structuring on Metals with Femto- and Attosecond Laser Sources |
| ngphy004c | Ms. Liz Coleman | Evaluating Tropospheric Ozone Pollution and Climatic Impact in over the North East Atlantic in the 21st Century |
| nmcom001c | Dr. Victor Lazzarini | Parallel Implementation of Csound 5 |
| nmcom002c | Dr. Diarmuid O'Donoghue | Genetic Repair in Genetic Algorithms |
| nmcom003c | Ms. Leanne Haggerty | Evolution of Homology Networks |
| nmcom004c | Dr. Alexei Pozdnoukhov | Scalable Spatial Analytics |
| nmear001c | Dr. Rowan Fealy | Dynamical Regional Climate Modelling for Ireland employing the Weather Research Forecasting (WRF) regional climate model |
| nmear002c | Ms. Aoife Doherty | Analysing duplication patterns in interacting proteins in primates. |
| nmlif001c | Dr. James Cotton | Understanding the Origins of Eukaryotic Genes and Genomes |
| nmlif002c | Dr. James McInerney | The Tree of one hundred percent |
| nmlif003c | Dr. Davide Pisani | INFERRING THE EUKARYOTIC TREE OF LIFE USING PARTIAL GENOMES |
| nmlif005c | Dr. Davide Pisani | INFERRING THE EUKARYOTIC TREE OF LIFE USING PARTIAL GENOMES: METHODOLOGICAL ASPECTS |
| nmlif006c | Dr. James McInerney | Evolution of metabolism in Escherichia coli and its relatives |
| nmlif007c | Prof. Ann Burnell | Annotation & analysis of the Panagrolaimus superbus genome. |
| nmlif008c | Dr. James McInerney | Metabolic Network Evolution in Escherichia coli and relatives |
| nmlif009c | Mr. Brian Daly | Genome Assembly of Next-generation Sequencing Data |
| nmlif010c | Ms. Therese Anne Holton | Inferring the eukaryotic tree of life |
| nmlif011c | Ms. Aoife Doherty | Comparison of gene duplicaton and loss in mammals,with the evolution of their protein-protein interaction, gene regulatory and metabolic networks |
| nmlif012c | Mr. Lahcen Campbell | MicroRNAs and the evolution of Arthropoda |
| nmlif013c | Ms. Carla Cummins | Reconstructing ancestral metabolism of the YESS group |
| nmlif014c | Ms. Sinead Hamilton | Use it or loose it: Sensory adaptation and evolution |
| nmlif015c | Mr. Peter Clarke | Metabolic network evolution in Escherichia coli |
| nmlif016c | Dr. Omar Rota Stabelli | DATING ARTHROPOD RELATIONSHIPS USING RELAXED CLOCK, SOFT CONSTRAINS AND DIVERSE PHYLOGENOMIC DATASETS |
| nmlif018c | Mr. Roberto Fueda | A phylogenomic investigation of GPCRs super family |
| nmlif019c | Ms. Georgina O'Mahony Zamora | Transcriptomic and Genomic Analyses of the Nematode Panagrolaimus superbus |
| nmphy001c | Dr. Jiri Vala | Diagonalization of large sparse matrices using a relaxation method |
| nmphy004c | Dr. Jiri Vala | Braiding of Non-Abelian Anyons in the Kitaev Honeycomb Model |
| nmphy005c | Dr. Jonivar Skullerud | Pushing the strong interaction past its breaking point with highly anisotropic lattices |
| tcast001c | Dr. Cian Crowley | Radiative Transfer in the Atmospheres of Cool Giant Stars |
| tcche001c | Dr. Justine Taylor | A Molecular Dynamics Benchmark Study: Infiniband vs. Gigabit Ethernet Performance |
| tcche002c | Prof. Graeme Watson | Electronic Structure Studies of Transparent Semiconductors |
| tcche013c | Dr. Natasha Galea | Modeling Oxidation States of Ce within Cerium Oxide using DFT+U and Hybrid-DFT : Choosing an Appropriate U |
| tcche018c | Dr. Giorgio Carta | The development of a Document Oriented Database schema to support High Throughput Virtual Screening (HTVS) work-flows |
| tcche019c | Dr. Fernando Blanco | Study of Weak Interactions in Protein-Ligand Models using Quantum Mechanical Calculations to Aid the Design of Novel LXRalpha Modulators. |
| tcche020c | Dr. Michael Bridge | Investigating deNOx on Rh, Pd and Pt {111} metal surfaces |
| tcche023c | Dr. Dario Marrocchelli | Understanding the Li conduction mechanism in glassy electrolytes for Lithium Ion batteries. |
| tcche024c | Dr. Isabel Rozas | Cation-pi interactions: complexes of guanidinium and DNA/RNA bases |
| tcche025c | Mr. Brendan Kelly | Computational study of π-π interactions versus cation-π interactions established by different pyridinylguanidinium systems and simple aromatic rings |
| tcche029c | Dr. Dario Marrocchelli | Modelling of ceria-zirconia systems for oxygen storage applications. |
| tcche033c | Dr. Dario Marrocchelli | Structural and Conducting Properties of doped LaGaO3 |
| tcche036c | Dr. Michael Bridge | Investigating the deNOx ability of the stepped Rh {443} surface |
| tccom001c | Mr. Alfredo Maldonado Guerra | Word discrimination and sense clustering |
| tccom002c | Mr. Hicham Lahlou | GPGPU computing. The purpose is to test how parallel applications scale to multi-GPU clusters. |
| tceng001c | Dr. Craig Meskell | Investigation of fluid forces responsible for fluid elastic instability in tube arrays. |
| tceng002c | Dr. Kevin O'Kelly | Modeling of indentation fracture in polycrystalline, multi-phase ceramics |
| tclif001c | Dr. Gemma Kinsella | Investigating the role of selective dopamine D1-like receptor signalling. |
| tclif002c | Dr. Gemma Kinsella | Development of Antagonist Induced Conformations of the Androgen Receptor |
| tclif005c | Dr. Jeffrey Mower | Assembly of mitochondrial genomes from whole genome sequencing projects |
| tclif007c | Mr. Xiaowei Jiang | Evolution of bacterial secretion systems |
| tclif008c | Mr. Matthew Teasdale | Population Genetics of Modern and Ancient Cattle |
| tclif009c | Ms. Aine Rourke | Detection of Remote Homologs between Homo sapiens and Saccharomyces cerevisiae |
| tclif010c | Dr. Mario Ali Fares | Whole-genome analysis of co-evolution and functional divergence |
| tclif011c | Dr. David Aragao | Structure-function studies of integral membrane proteins and peptides |
| tclif013c | Dr. Valerie Pye | Reducing the Time to Structure for Membrane Protein X-ray Crystallography. |
| tcphy002c | Dr. Mauro Ferreira | Numerical studies of carbon nanotube / polymer composites |
| tcphy006c | Dr. Claude Ederer | Exploring new functionalities in complex oxides |
| tcphy009c | Mr. Luiz Pereira | Charge transport across disordered carbon nanotube networks |
| tcphy010c | Dr. Claude Ederer | Exploring new functionalities in complex oxides |
| tcphy014c | Mr. Stephen Power | Magnetic and electronic properties of disordered graphene systems |
| tcphy019c | Mr. Aurab Chakrabarty | Ab-initio calculation of electron paramagnetic resonance g-tensor of oxide semiconductors. |
| tcphy020c | Dr. Graham Cross | Coating nanomechanics for drug eluting stent implants |
| tcphy023c | Mr. Andrea Droghetti | Testing the Casino Quantum Monte Carlo code to study Spin Crossover Molecules |
| tcphy025c | Mr. Awadhesh Narayan | Electron-phonon effects in Topological Insulators |
| tcphy026c | Mr. Eric Mehes | Phonon and Vacancy Calculations on HfO2 as a high-k Dielectric |
| tcphy027c | Dr. Stefan Sint | Scale evolution of the strong coupling constant in four flavour QCD |
| tglif001c | Dr. Orla O'Sullivan | Metagenomics for Food and Health |
| tglif002c | Dr. Chris Creevey | Metagenomic analysis of the ruminal microbial populations in cattle divergent for nutritional efficiency |
| tglif004c | Mr. Brian Meredith | Investigation of the genetic basis of mastitis resistance and bovine milk production traits using gene expression and genome-wide association data |
| tglif005c | Dr. Heather Wiencko | Bovine Genetic Variation and Disease Susceptibility |
| tiche014c | Mr. Jakub Baran | Theoretical Investigation of Adsorption of Metal-Phthalocyanies (M=Co,Sn,Pb) on Ag(111) surface. |
| tiche016c | Dr. Simon Elliott | Interim time for SIGMUND (#4092) |
| tiche019c | Dr. Michael Nolan | First Principles Simulations of Gold Nanoparticle Binding Events |
| tiche022c | Dr. Michael Nolan | Testing of OpenMX Scaling |
| tiche024c | Ms. Sarah Jones | Ab initio molecular dynamics of carbon nanotube growth |
| tiche025c | Dr. Michael Nolan | Interim time for SiNAPS |
| tiche027c | Dr. Damien Thompson | Quantifying charge balancing in metal-mediated protein self-assembly |
| tiche029c | Dr. Damien Thompson | Computer-aided design of controllable interfaces for nanoelectronics |
| tiche031c | Dr. Michael Nolan | Testing the Octopus Code for the Prediction of Optical Properties of Materials |
| tiche033c | Dr. Ciaran Murray | Accelerated Molecular Dynamics Simulations for the Atomic Layer Deposition of Copper Thin Films |
| tieng002c | Dr. Jim Greer | Investigation of the nature of defect states in InGaAs using Ab-Initio methods |
| tieng003c | Mrs. Lida Ansari | First Principles Simulations of Junction-less Carbon Nanotube (CNT) Field Effect Transistor(FET) |
| tiphy003c | Dr. Sian Joyce | First principles predictions of nuclear magnetic resonance J-coupling |
| tiphy006c | Dr. Jim Greer | Atomic scale model interfaces between high-k silicates and germanium |
| tiphy010c | Dr. Giorgos Fagas | Electronic Properties of Oxidised Silicon Nanowires |
| tiphy011c | Dr. Jim Greer | Monte Carlo Configuration Generation for Electronic Structure Computations |
| tiphy013c | Mr. Marios Iakovidis | Computer Simulations for Technology Design: A Divide, Reduce and Conquer Algorithm for Matrix Diagonalization. |
| tiphy014c | Dr. Muhammad Usman | Electronic Structure Calculations of GaBiAs and GaBiNAs Materials |
| tiphy015c | Ms. Siobhan O' Halloran | First-principles calculation of alloy scattering in III-V semiconductors using Quantum ESPRESSO code |
| tiphy016c | Mr. Marios Iakovidis | A Divide-Reduce-Conquer (DRC) Algorithm for Matrix Diagonalization |
| tiphy017c | Dr. Felipe Murphy | Performance of Nemo3d in hpc clusters |
| ucast001c | Dr. Mark Hannam | Gravitational waves from black-hole binary collisions |
| ucast002c | Dr. Mark Hannam | Gravitational waves from black-hole binary collisions |
| ucche001c | Dr. Noel O'Boyle | Computational design of molecular wires for solar cells |
| ucche002c | Dr. Noel O'Boyle | Benchmarking and Profiling of Open Babel |
| ucche003c | Dr. Noel O'Boyle | Computational investigation of Cu-catalysed intramolecular C–H insertion reactions |
| uclif001c | Dr. Charles Spillane | Identification of orphan (ORFan) genes in fully sequenced genomes of higher eukaryotes. |
| uclif003c | Dr. Pavel Baranov | Simulation of the triplet genetic code evolution |
| uclif004c | Dr. Daniel Falush | Application of copying model approach to Helicobacter pylori. |
| uclif005c | Dr. Pavel Baranov | Identification of indel RNA editing patterns in the human genome |
| uclif006c | Dr. Charles Spillane | Identifying Taxon Restricted Genes in Higher Plants |
| uclif008c | Dr. Marcus Claesson | Genome analysis of gut microbiota and microbiomes |
| uclif009c | Dr. Marcus Claesson | Metagenomic analysis of human gut microbiomes |
| ucmat001c | Dr. Kingshuk Roy Choudhury | Analysis of wave field images |
| ucphy001c | Dr. Michael Flynn | Intensive Numerical Simulation of Quantum-Dot Semiconductor Diode Laser Dynamics |
| ucphy003c | Dr. Maria Elena Grillo | Charge retention in SONOS non-volatile memory devices: oxide-nitride interfaces and deposition process |
| ucphy004c | Mr. Tadhg Morgan | Coherent Control of Atoms On Atom Chips Using STIRAP |
| ucphy005c | Dr. Thomas Busch | Coherent Control of Atoms On Atom Chips Using CTAP |
| ulche002c | Dr. Jacek Zeglinski | First-principles simulation of the elastic properties of glass |
| uleng001c | Prof. Noel O'Dowd | Effect of residual stress/strain on high temperature creep of polycrystals: A multiscale finite element analysis |
| uleng002c | Mechanical behaviour of interlinked carbon nanotubes for nanocomposites and their potential pathogenicity | |
| uleng004c | Dr. Denis O'Mahoney | Combined 3D finite element and response surface methods to predict the strength of adhesively bonded composite structures under impact loading |
| uleng005c | Mr. Donal O'Dwyer | Failure Prediction of Bonded-Bolted Composite Joints |
| uleng006c | Mr. Brian Egan | Finite Element Modelling of Countersunk Composite Joints subjected to Variable-Rate Loadings |
| uleng008c | Mr. Ronan Frizzell | Predicting the Effects of Damage Initiation and Growth in Composite Aircraft Structures Using a Continuum Damage Mechanics Approach |
| uleng009c | Mr. Mark Hardiman | Simulation of Nanoindentation of Fibrous Composites |
| ulmat001c | Dr. Davide Cellai | Stochastic simulations of product adoption models |
| ulphy001c | Dr. Zakia Rahman | Multi scale Modelling of Rare Earth Doped Nanowires |
| ulphy002c | Dr. Jacek Zeglinski | Piezoelectric tensors of strontium-doped hydroxyapatite from ab-initio calculations |
Cosmogrid Projects
Between the September 1st, 2005 and the decommissioning of the Walton and Hamilton services in December 2008, 42 Cosmogrid research projects were approved.
| Code | PI | Title |
|---|---|---|
| cg001 | Dr. Mark Eric Dieckmann | Large-scale particle-in-cell simulations of ultrarelativistic two stream instabilities |
| cg002 | Dr. Padraig O'Connor | Investigating Pulsars |
| cg003 | Mr. Sean Corkery | The Stability of Rotating Jets: Numerical Simulations. |
| cg004 | Ms. Daniela Pandolfi | map an model crustal damages |
| cg005 | Mr. Szymon Gladysz | A model of the eclipse shadow bands formation |
| cg006 | Dr. Sebastien Leygnac | Radiation in astrophysical shocks |
| cg007 | Mr. Ray McGrath | Climate Modelling |
| cg008 | Dr. Edouard Audit | Radiation-hydrodynamics for Jets |
| cg009 | Dr. Gareth O'Brien | Seismic source modelling and wave propagation in volcanoes |
| cg010 | Mr. Stephen Bourke | Searching for Binary Pulsars |
| cg011 | Mr. Gregg Hallinan | Development of a Parallel, Fully Relativistic, 3-Dimensional, Particle-in-Cell Code to Model Electron Cyclotron Maser Emission from Brown Dwarfs |
| cg012 | Dr. John MacDonald | Large scale Modular 3D Relativistic, Fully Parallel Simulation of a Pulsar Magnetosphere using P.I.C methodology. |
| cg013 | Dr. Andrea Ciardi | A Laboratory Astrophysics Investigation of Jets |
| cg014 | Dr. Ivan Lokmer | Moment-tensor inversion for the long-period seismic sources before the Mt. Etna 2004 eruption |
| cg015 | Mr. Brian Clayton | Parallel Approximate Finite Element Inverse Preconditioning on Distributed Systems |
| cg016 | Mr. Brian Reville | MHD wave excitation in astrophysical shocks |
| cg017 | Dr. Thibaut Lery | Star formation simulations |
| cg018 | Dr. Gareth Murphy | Modelling Astrophysical Jets |
| cg019 | Mr. Anthony Moraghan | A new study of Magnetohydrodynamic jets |
| cg020 | Dr. Fabio De Colle | Jet Simulations using a shared memory system |
| cg021 | Dr. Alex Rosen | Initialisation of molecular ZEUS-3D on hamilton |
| cg022 | Dr. Celine Ravaut | Full waveform inversion for geophysical imaging |
| cg023 | Mr. Andrew Cunningham | Protostellar Outflow Driven Turbulence |
| cg024 | Dr. James MacDonald | Discrete Dipole Approximation Scattering Simulation |
| cg025 | Ms. Anna Avdeeva | CosmoGrid |
| cg026 | Dr. Stephen O'Sullivan | Multifluid simulations of dense molecular clouds |
| cg027 | Dr. Dmitry Avdeev | geoelectromagnetic modelling and inversion in three dimensions |
| cg028 | Dr. Brian Espey | Understanding mass loss in stars like the Sun |
| cg029 | Dr. Andrew Lim | Simulations of Magnetically Dominated Regions of The ISM |
| cg030 | Dr. Brian Coghlan | Evaluating SMG on a real SMP |
| cg031 | Dr. Jose Gracia | Large-scale simulations of jets |
| cg032 | Dr. Conor Masterson | Monte Carlo simulations of very high energy gamma-raysources for H.E.S.S. |
| cg033 | Dr. Andrea Mignone | Cooling and heating processes in Herbig-Haro jets |
| cg034 | Dr. Stephen O'Sullivan | Transport properties of relativistic particles in the turbulent magnetic fields of radio galaxy lobes |
| cg035 | Mr. Tobias Cornelius Hinse | N-Particle Dynamics and Mapping of Phase-Space Topology of Jovian Irregular Satellite Systems |
| cg036 | Dr. Stephen O'Sullivan | Transport of cosmic rays in self-excited magnetic turbulence |
| cg037 | Dr. Sarah Tanner | Multifluid Dynamo Simulations |
| cg038 | Mr. Jonathan Mackey | Radiative Transfer Effects on the Interstellar Medium (Code Development and Testing) |
| cg039 | Prof. Alan Jones | Development of a new 3D magnetotelluric inversion program and its application to the Southern African Magnetotelluric Experiment data |
| cg040 | Mr. Jamie O'Sullivan | JETSET - Molecular Cooling effects in Protostellar Jet propagation |
| cg041 | Mr. Alex Byrne | Particle Acceleration In A Turbulent Magnetic Field |
| cg042 | Mr. John Sheehan | Analogue modelling simulations |
Transitional Service
Between September 1st, 2005 and May 31st, 2006, 73 Transitional Service projects were approved:
| Code | PI | Title |
|---|---|---|
| cslif001 | Dr. Anthony J. Chubb | Computer-Aided Design of Novel Anti-Thrombotic Agents |
| cslif002 | Dr. Edelmiro Moman | Rational Design of Selective Inhibitors of the Two Catalytic Sites of Prostaglandin Endoperoxide Synthase. |
| dcche001 | Mr. William Henry | Interaction of Ru Polypridyls With Carbon Nanotubes. |
| dceng001 | Dr. Caitriona Lally | An investigation into the influence of cardiovascular stent design on arterial stresses and in-stent restenosis using the finite element method |
| icear001 | Dr. Gerard Gorman | Parallel unstructured adaptive mesh method for three-dimensional range-of-scale ocean modelling |
| iclif002 | Dr. Gemma Kinsella | Structural Refinement Studies of the Nicotinic Receptor |
| icphy001 | Dr. JC Desplat | A study of 3-D binary fluid mixtures under shear |
| ndche001 | Dr. Maxim Fedorov | In silico study of conformational and thermodynamical properties of self-assembled structures formed by rationally designed oligopeptides. |
| ndeng001 | Dr. Scott Rickard | Enumeration of 27-by-27 Costas arrays |
| ndlif001 | Dr. Jens Nielsen | Re-Designing protein pKa values |
| ndlif002 | Dr. Matthew Sullivan | Analysis of proteomics mass spectum data for dynamic modifications |
| ndlif004 | Prof. Paul McKeigue | Modelling genetic admixture in human populations |
| ndlif005 | Dr. Gianluca Pollastri | Towards improved ab initio prediction of protein structures through accurate residue contact map prediction |
| ndlif006 | Mr. Gordon Blackshields | Parameter optimisation and over-optimisation in multiple sequence alignment |
| ndlif007 | Dr. David Fitzpatrick | Comparative genomics of pathogenic Candida species |
| ndlif008 | Mr. Iain Wallace | Designing a Multiple Domain Database for benchmarking multiple sequence aligment methods |
| ndlif009 | Mr. Ian Jeffery | Comparison and evaluation of microarray feature selection methods. |
| ndmat001 | Ms. Laura Kirwan | Simulation study to test the reliability of a Taylor Series approximation to the standard errors of predicted proportions resulting from an RGRD analysis |
| ndphy001 | Dr. Ronan McNulty | Resource discovery for particle physics simulations |
| ndphy002 | Dr. Dominic Zerulla | Surface Plasmon Polaritons on Tuneable Nanostructures for the Detection of Conformational Changes in Proteins |
| ngast001 | Dr. Matt Redman | Inhomogeneous accretion flows and massive star formation |
| ngche001 | Prof. John Simmie | Towards a World Class Combustion Chemistry Centre |
| ngcom001 | Dr. Michael Browne | Optimising external computation for Euro50 integrated model |
| ngear001 | Dr. Colin Brown | Multibeam acoustic backscatter modelling in the marine environment |
| ngear002 | Dr. Michael Hartnett | Predictive Irish Sea Model |
| ngear003 | Mr. Martin Kenirons | Tectonic studies in bathymetric data |
| ngeng001 | Dr. Denis O'Mahoney | Parallel Element by Element Solution of Voxel Generated Finite Element Meshes of Trabecular Bone |
| ngeng002 | Mr. Frank Harewood | Microscale modelling of the mechanical behaviour of Cardiovascular Stents |
| ngeng003 | Dr. Noel Harrison | Finite Element Mesh Generation and Postprocessing from CT scans of Trabecular Bone |
| ngeng004 | Dr. Xiaochuan You | Microscale modelling of the wear behaviour of thin self-lubricating coatings |
| ngeng005 | Mr. Daniel Ilie | Testing and Modelling to Determine Size Effects in Small Metallic Cardiovascular Devices |
| ngeng006 | Dr. Noel Harrison | Computational modelling of Trabecualr Bone using ABAQUS |
| ngeng007 | Mr. Brendan Flaherty | A continuum finite element model predicting cell motility |
| ngeng008 | Mr. Liam Mullins | Characterisation of the Fracture Behaviour of Cortical Bone |
| ngeng009 | Dr. Nathan Quinlan | Large Eddy Simulation of Turbulent Wind Loading on an Extremely Large Telescope |
| ngeng010 | Mr. Kevin Heraty | Characterising the fluid dynamics and particle trajectories in anatomically realistic airway bifurcations |
| nghum001 | Dr. Michael McGettrick | Markovian Structures in Irish music |
| nglif001 | Dr. Aaron Golden | Identification of Transcription Factor Binding Sites Associated with Imprinted Genes in Human using SOMBRERO |
| nglif002 | Mr. Shaun Mahony | Comparing the performance of motif-finders in a model genome |
| nglif003 | Dr. Aaron Golden | Characterising ChIP-chip derived CTCF binding site motifs Genomewide |
| ngmat001 | Dr. Goetz Pfeiffer | COMPUTING SUBGROUPS OF ALMOST SIMPLE GROUPS. |
| ngphy001 | Dr. Dmitriy Ivanov | Computational Investigation of Nanojet Formation Mechanism by Short Laser Pulse on a Metal Films. |
| ngphy002 | Mr. Patrick Downes | Medical Physics simulations of radiotherapy machines |
| nmcom001 | Mr. Damien Tully | Biomedical and computational analyses of cell-protein interactions with RNA viruses |
| nmlif001 | Dr. Jennifer Commins | Ramble: The Evolution Simulator |
| nmlif002 | Mr. Thomas Keane | Eukaryote Phylogeny |
| nmlif003 | Dr. Davide Pisani | Methodological Aspects in the reconstruction of the tree of life |
| nmlif004 | Dr. Gayle Philip | Tracing the Origin of Plasmodium falciparum genes |
| nmlif005 | Mr. David McNally | Heat Shock Proteins in Prokaryotes |
| nmlif006 | Dr. Simon Travers | Large scale analysis of inter-protein coevolution |
| nmphy001 | Dr. Vladimir Yurchenko | Simulations of the Broadband HFI-100 Beams of the ESA Planck Telescope |
| tcast001 | Dr. Brian Espey | Intelligent Software Analysis of Astronomical Spectra DBs |
| tcast002 | Dr. Brian Espey | Understanding mass loss in stars like the Sun |
| tcche001 | Dr. Isabel Rozas | Designing and modeling new catalysts for the Baylis-Hilman reaction |
| tclif001 | Prof. Kenneth Wolfe | Assembling the genome sequence of the yeast Kluyveromyces polysporus |
| tcphy001 | Dr. Sri Chaitanya Das Pemmaraju | Theoretical Studies into teh Ferromagnetism of Strongly Correlated Dilute Magnetic Semiconductors |
| tcphy002 | Dr. Maria Stamenova | Current-driven geometric and magnetic rearrangements in spin-polarized point contacts |
| tcphy003 | Dr. Stefan Hutzler | Numerical Studies of Granular Materials and Foams |
| tcphy004 | Mr. Shane Magee | Simulated annealing of light nuclei in the Skyrme model |
| tcphy005 | Mr. Andrew Wall | Electronic Properties of Doped Carbon Nanotubes |
| tcphy006 | Prof. Stefano Sanvito | SPIN-ORBIT COUPLING IN MOLECULAR CHAINS, HETEROSTRUCTURES AND POINT CONTACTS |
| tcphy007 | Mr. Alexandre Rocha | Transport properties of nanoscale devices |
| tcphy008 | Mr. Ruairi Hanafin | Monte Carlo Simulations of donor impurity band exchange in dilute ferromagnetic oxides |
| tcphy009 | Mr. Nicola Jean | Inelastic transport through atomic chains |
| tiche001 | Dr. Damien Thompson | Simulation of molecular printboards for nanopatterning |
| tiche002 | Dr. Jim Greer | Installation and test of MCCI |
| tieng001 | Mr. Scott Monaghan | Energy Optimization and Molecular Dynamics Simulations on Interfacial Stacks of Silicon, Silica and Hafnium Silicates |
| tieng002 | Dr. Michael Nolan | Modelling of the Electronic Properties of Novel Transparent Conducting Oxides |
| tiphy001 | Dr. Simon Elliott | Large-scale, high-precision calculations of low-temperature magnetite |
| tiphy002 | Dr. Geoffrey Stenuit | Electronic transport and vibrational properties in dilute nitrides |
| uceng001 | Dr. Liam Marnane | Analysis of new Low Density Parity Check Codes |
| uclif001 | Dr. Mary O'Connell | Evolution of Mammalian proteins |
| ulphy001 | Dr. Zakia Rahman | Multi scale Modelling of Rare Earth Doped Nanowires |